Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family two component transcriptional regulator | CLV32_0859 | Not Available | Positive | 944221 - 944961 | 28685.0 |
| hypothetical protein | CLV32_0860 | Not Available | Negative | 944970 - 945107 | 4944.08 |
| histidine kinase | CLV32_0861 | Not Available | Positive | 945169 - 946254 | 41668.4 |
| catechol 2,3-dioxygenase-like lactoylglutathione lyase family enzyme | CLV32_0862 | Not Available | Positive | 946370 - 946819 | 17409.9 |
| helix-turn-helix protein | CLV32_0863 | Not Available | Positive | 946850 - 947665 | 31472.9 |
| hypothetical protein | CLV32_0864 | Not Available | Positive | 947730 - 948212 | 18315.2 |
| hxlr family transcriptional regulator | CLV32_0865 | Not Available | Negative | 948239 - 948589 | 13415.5 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | CLV32_0866 | Not Available | Positive | 948694 - 949437 | 25675.6 |
| fructan beta-fructosidase | CLV32_0867 | Not Available | Negative | 949512 - 951026 | 56744.6 |
| putative outer membrane starch-binding protein | CLV32_0868 | Not Available | Negative | 951055 - 952773 | 63660.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
