Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exopolyphosphatase/guanosine-5'-triphosphate, 3'-diphosphate pyrophosphatase | CLV32_0629 | Not Available | Negative | 678536 - 679420 | 33371.6 |
| polyphosphate kinase | CLV32_0630 | Not Available | Negative | 679420 - 681477 | 79753.0 |
| hypothetical protein | CLV32_0631 | Not Available | Negative | 681593 - 682102 | 18043.3 |
| hypothetical protein | CLV32_0632 | Not Available | Positive | 682266 - 682757 | 18252.0 |
| acetyltransferase (gnat) family protein | CLV32_0633 | Not Available | Positive | 682757 - 683191 | 16733.3 |
| hypothetical protein | CLV32_0634 | Not Available | Negative | 683192 - 684502 | 48781.3 |
| peptide/nickel transport system atp-binding protein | CLV32_0635 | Not Available | Positive | 684531 - 686282 | 64822.7 |
| ribonuclease r | CLV32_0636 | Not Available | Positive | 686344 - 688476 | 80984.8 |
| geranylgeranyl diphosphate synthase type ii | CLV32_0637 | Not Available | Positive | 688506 - 689474 | 35917.4 |
| transcriptional regulator with xre-family hth domain | CLV32_0638 | Not Available | Positive | 689876 - 690694 | 31666.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
