Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | CLV32_0509 | Not Available | Negative | 532152 - 535397 | 117814.0 |
| galacturan 1,4-alpha-galacturonidase | CLV32_0510 | Not Available | Negative | 535577 - 536848 | 45866.4 |
| putative outer membrane starch-binding protein | CLV32_0511 | Not Available | Negative | 536932 - 538578 | 61530.7 |
| tonb-linked susc/raga family outer membrane protein | CLV32_0512 | Not Available | Negative | 538589 - 541645 | 109825.0 |
| beta-glucosidase | CLV32_0513 | Not Available | Negative | 541912 - 544542 | 96701.5 |
| pas domain s-box-containing protein | CLV32_0514 | Not Available | Negative | 544684 - 545682 | 38347.8 |
| transcriptional regulator | CLV32_0515 | Not Available | Negative | 545823 - 546035 | 7826.81 |
| protein of unknown function (duf2975) | CLV32_0516 | Not Available | Negative | 546040 - 546579 | 20026.2 |
| enamine deaminase rida (yjgf/yer057c/uk114 family) | CLV32_0517 | Not Available | Positive | 546844 - 547359 | 18414.9 |
| pimeloyl-acp methyl ester carboxylesterase | CLV32_0518 | Not Available | Positive | 547396 - 548172 | 27324.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
