Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s15 | CLV32_0448 | Not Available | Negative | 463907 - 464212 | 11579.2 |
| acyl-coa thioester hydrolase/thioesterase-3 | CLV32_0449 | Not Available | Positive | 464342 - 464761 | 16301.7 |
| putative mate family efflux protein | CLV32_0450 | Not Available | Positive | 464765 - 466180 | 50549.1 |
| d-alanine-d-alanine ligase | CLV32_0451 | Not Available | Negative | 466177 - 467163 | 36329.6 |
| beta-lactam-binding protein with pasta domain | CLV32_0452 | Not Available | Positive | 467329 - 468099 | 27918.7 |
| upf0755 protein | CLV32_0453 | Not Available | Positive | 468114 - 469166 | 39736.1 |
| acyl-coa thioester hydrolase | CLV32_0454 | Not Available | Positive | 469171 - 469578 | 15804.1 |
| membrane protein | CLV32_0455 | Not Available | Positive | 469633 - 470571 | 35588.4 |
| lyttr family two component transcriptional regulator | CLV32_0456 | Not Available | Negative | 470632 - 471306 | 25602.5 |
| histidine kinase | CLV32_0457 | Not Available | Negative | 471303 - 472382 | 41803.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
