Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyryl-coa dehydrogenase | CLV32_0409 | Not Available | Positive | 421345 - 422238 | 32168.6 |
| holliday junction dna helicase subunit ruvb | CLV32_0410 | Not Available | Positive | 422272 - 423294 | 37844.5 |
| hypothetical protein | CLV32_0411 | Not Available | Negative | 423295 - 423504 | 7946.41 |
| epoxyqueuosine reductase | CLV32_0412 | Not Available | Positive | 423581 - 424516 | 35476.5 |
| hypothetical protein | CLV32_0413 | Not Available | Negative | 424520 - 426379 | 70756.1 |
| dna polymerase-3 subunit epsilon | CLV32_0414 | Not Available | Negative | 426418 - 427383 | 36834.1 |
| transglutaminase superfamily protein | CLV32_0415 | Not Available | Positive | 427563 - 429539 | 74562.6 |
| transglutaminase superfamily protein | CLV32_0416 | Not Available | Positive | 429541 - 431463 | 72523.6 |
| hypothetical protein | CLV32_0417 | Not Available | Negative | 431447 - 431569 | 4624.93 |
| lipoprotein spr/probable lipoprotein nlpc | CLV32_0418 | Not Available | Negative | 431573 - 432073 | 18349.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
