Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | CLV32_0369 | Not Available | Negative | 375509 - 375928 | 16089.4 |
| light-regulated signal transduction histidine kinase (bacteriophytochrome) | CLV32_0370 | Not Available | Negative | 375935 - 378151 | 82704.4 |
| oop family ompa-ompf porin | CLV32_0371 | Not Available | Positive | 378451 - 379794 | 48028.5 |
| hypothetical protein | CLV32_0372 | Not Available | Negative | 379845 - 380174 | 12574.2 |
| lycopene beta-cyclase | CLV32_0373 | Not Available | Negative | 380175 - 381350 | 44694.3 |
| response regulator receiver domain-containing protein | CLV32_0374 | Not Available | Negative | 381426 - 381863 | 16448.6 |
| pas domain s-box-containing protein | CLV32_0375 | Not Available | Negative | 381850 - 382923 | 40912.1 |
| dimethylhistidine n-methyltransferase | CLV32_0376 | Not Available | Negative | 383099 - 384043 | 35315.1 |
| ergothioneine biosynthesis protein egtb | CLV32_0377 | Not Available | Negative | 384043 - 385194 | 44689.3 |
| osmoprotectant transport system permease protein | CLV32_0378 | Not Available | Negative | 385201 - 386763 | 57373.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
