Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit | CLV32_0299 | Not Available | Negative | 302838 - 303170 | 12316.8 |
| organic radical activating enzyme | CLV32_0300 | Not Available | Positive | 303252 - 303875 | 23330.8 |
| wd40 repeat protein | CLV32_0301 | Not Available | Positive | 303919 - 305814 | 70202.3 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | CLV32_0302 | Not Available | Negative | 305830 - 306645 | 29284.5 |
| atp-dependent dna helicase recq | CLV32_0303 | Not Available | Negative | 306655 - 308844 | 82494.1 |
| arabinose-5-phosphate isomerase | CLV32_0304 | Not Available | Positive | 308934 - 309899 | 34548.5 |
| mannose-1-phosphate guanylyltransferase (gdp) | CLV32_0305 | Not Available | Positive | 309925 - 311016 | 40452.4 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | CLV32_0306 | Not Available | Negative | 311013 - 311783 | 27982.1 |
| replicative dna helicase | CLV32_0307 | Not Available | Positive | 312058 - 313635 | 58694.1 |
| chromate transporter | CLV32_0308 | Not Available | Negative | 313640 - 314839 | 43806.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
