Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | CLV32_2366 | Not Available | Positive | 2690746 - 2691630 | 33054.3 |
| peptidase s41-like protein | CLV32_2367 | Not Available | Positive | 2691841 - 2693415 | 60518.9 |
| uncharacterized protein duf4260 | CLV32_2368 | Not Available | Negative | 2693456 - 2693839 | 13945.6 |
| crp-like camp-binding protein | CLV32_2369 | Not Available | Negative | 2693914 - 2694507 | 23034.1 |
| rimj/riml family protein n-acetyltransferase | CLV32_2370 | Not Available | Negative | 2694564 - 2695061 | 18765.4 |
| hypothetical protein | CLV32_2371 | Not Available | Negative | 2695191 - 2696009 | 31616.6 |
| histidine kinase | CLV32_2372 | Not Available | Positive | 2696238 - 2697257 | 39301.8 |
| lyttr family two component transcriptional regulator | CLV32_2373 | Not Available | Positive | 2697254 - 2697964 | 26991.8 |
| tfox/sxy family transcriptional regulator of competence genes | CLV32_2374 | Not Available | Negative | 2697974 - 2698297 | 11900.3 |
| hypothetical protein | CLV32_2375 | Not Available | Negative | 2698441 - 2699058 | 23393.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
