Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyceraldehyde 3-phosphate dehydrogenase | CLV32_2093 | Not Available | Negative | 2374936 - 2375937 | 36077.2 |
| pas domain-containing protein | CLV32_2094 | Not Available | Negative | 2375986 - 2376600 | 23496.2 |
| gliding motility-associated-like protein | CLV32_2095 | Not Available | Positive | 2376863 - 2379496 | 92414.7 |
| type ix secretion system porp/sprf family membrane protein | CLV32_2096 | Not Available | Positive | 2379493 - 2380497 | 36779.6 |
| wd40 repeat protein | CLV32_2097 | Not Available | Positive | 2380507 - 2382756 | 83755.3 |
| hypothetical protein | CLV32_2098 | Not Available | Negative | 2382823 - 2383668 | 32149.7 |
| uncharacterized protein duf4886 | CLV32_2099 | Not Available | Negative | 2383686 - 2384609 | 34844.5 |
| rhamnogalacturonyl hydrolase yesr | CLV32_2100 | Not Available | Negative | 2384623 - 2385777 | 43523.9 |
| alpha-galactosidase | CLV32_2101 | Not Available | Negative | 2385795 - 2387999 | 83989.6 |
| glycosyl hydrolase family 16 | CLV32_2102 | Not Available | Negative | 2388009 - 2388872 | 33516.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
