Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin reductase (dim6/ntab) family nadh-fmn oxidoreductase rutf | CLV32_2043 | Not Available | Negative | 2314296 - 2315186 | 32603.3 |
| fumarylacetoacetate hydrolase | CLV32_2044 | Not Available | Negative | 2315186 - 2316181 | 36708.0 |
| homogentisate 1,2-dioxygenase | CLV32_2045 | Not Available | Positive | 2316518 - 2317684 | 44727.1 |
| 4-hydroxyphenylpyruvate dioxygenase | CLV32_2046 | Not Available | Positive | 2317710 - 2318840 | 42570.3 |
| membrane protein | CLV32_2047 | Not Available | Positive | 2318971 - 2319891 | 34748.4 |
| hypothetical protein | CLV32_2048 | Not Available | Negative | 2319888 - 2320163 | 10241.5 |
| outer membrane protein with beta-barrel domain | CLV32_2049 | Not Available | Negative | 2320272 - 2320859 | 20773.2 |
| hypothetical protein | CLV32_2050 | Not Available | Positive | 2320870 - 2320980 | 4398.49 |
| signal transduction histidine kinase | CLV32_2051 | Not Available | Positive | 2321007 - 2322788 | 67493.6 |
| tetratricopeptide repeat protein | CLV32_2052 | Not Available | Positive | 2322843 - 2323988 | 43355.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
