Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septum formation protein | CLV32_1993 | Not Available | Negative | 2269169 - 2269738 | 21269.8 |
| hypothetical protein | CLV32_1994 | Not Available | Negative | 2269809 - 2270201 | 14271.2 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | CLV32_1995 | Not Available | Negative | 2270311 - 2270847 | 19468.7 |
| fes assembly protein iscx | CLV32_1996 | Not Available | Negative | 2270847 - 2271092 | 9859.41 |
| 2fe-2s ferredoxin | CLV32_1997 | Not Available | Negative | 2271111 - 2271443 | 12071.4 |
| putative short-subunit dehydrogenase-like oxidoreductase (duf2520 family) | CLV32_1998 | Not Available | Negative | 2271483 - 2272244 | 27444.9 |
| cytochrome c-type biogenesis protein ccmf | CLV32_1999 | Not Available | Negative | 2272244 - 2274712 | 92590.2 |
| cytochrome c-type biogenesis protein ccme | CLV32_2000 | Not Available | Negative | 2274717 - 2275250 | 20512.1 |
| peptide-methionine (s)-s-oxide reductase | CLV32_2001 | Not Available | Negative | 2275292 - 2275969 | 25080.8 |
| glutamate dehydrogenase (nad(p)+) | CLV32_2002 | Not Available | Negative | 2276095 - 2277516 | 51630.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
