Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol-phosphate aminotransferase | CLV32_1973 | Not Available | Positive | 2246665 - 2247711 | 39185.8 |
| imidazoleglycerol-phosphate dehydratase | CLV32_1974 | Not Available | Positive | 2247714 - 2248847 | 42427.6 |
| glutamine amidotransferase | CLV32_1975 | Not Available | Positive | 2248847 - 2249440 | 21647.0 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | CLV32_1976 | Not Available | Positive | 2249442 - 2250191 | 27991.9 |
| cyclase | CLV32_1977 | Not Available | Positive | 2250195 - 2250950 | 26907.7 |
| phosphoribosyl-atp pyrophosphatase /phosphoribosyl-amp cyclohydrolase | CLV32_1978 | Not Available | Positive | 2250947 - 2251537 | 22144.4 |
| wd-40 repeat-containing protein | CLV32_1979 | Not Available | Positive | 2251543 - 2252439 | 33316.8 |
| tonb-dependent susc/raga subfamily outer membrane receptor | CLV32_1980 | Not Available | Negative | 2252436 - 2258318 | 221879.0 |
| sh3 domain-containing protein | CLV32_1981 | Not Available | Negative | 2258381 - 2259160 | 28989.7 |
| nucleotide-binding universal stress uspa family protein | CLV32_1982 | Not Available | Positive | 2259249 - 2259695 | 16137.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
