Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf3606 | CLV32_1873 | Not Available | Negative | 2133827 - 2134000 | 6632.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | CLV32_1874 | Not Available | Positive | 2134134 - 2134619 | 17371.0 |
| rna polymerase sigma-70 factor (ecf subfamily) | CLV32_1875 | Not Available | Negative | 2134616 - 2135203 | 22772.7 |
| fecr family protein | CLV32_1876 | Not Available | Positive | 2135341 - 2136483 | 42485.2 |
| tonb-linked susc/raga family outer membrane protein | CLV32_1877 | Not Available | Positive | 2136599 - 2139907 | 120534.0 |
| ragb/susd domain-containing protein | CLV32_1878 | Not Available | Positive | 2139918 - 2141561 | 60698.8 |
| glycosyl hydrolase family 67 | CLV32_1879 | Not Available | Positive | 2141571 - 2143664 | 77978.2 |
| putative alpha-1,2-mannosidase | CLV32_1880 | Not Available | Positive | 2143668 - 2147237 | 132482.0 |
| hypothetical protein | CLV32_1881 | Not Available | Positive | 2147555 - 2148193 | 23937.0 |
| fkbm family methyltransferase | CLV32_1882 | Not Available | Positive | 2148256 - 2149044 | 30025.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
