Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane fusion protein (multidrug efflux system) | CLV32_1863 | Not Available | Positive | 2122592 - 2123761 | 40799.8 |
| hae1 family hydrophobic/amphiphilic exporter-1 | CLV32_1864 | Not Available | Positive | 2123780 - 2126959 | 114280.0 |
| putative transcriptional regulator | CLV32_1865 | Not Available | Positive | 2127110 - 2127481 | 14274.2 |
| blar1 peptidase m56 | CLV32_1866 | Not Available | Positive | 2127478 - 2128947 | 57202.8 |
| lyttr family two component transcriptional regulator | CLV32_1867 | Not Available | Negative | 2128987 - 2129658 | 25685.5 |
| histidine kinase | CLV32_1868 | Not Available | Negative | 2129655 - 2130545 | 34837.8 |
| selenocysteine lyase/cysteine desulfurase | CLV32_1869 | Not Available | Negative | 2130780 - 2131856 | 40631.4 |
| hypothetical protein | CLV32_1870 | Not Available | Negative | 2131880 - 2132203 | 13155.1 |
| putative membrane protein | CLV32_1871 | Not Available | Positive | 2132275 - 2133189 | 34870.8 |
| osmotically inducible protein osmc | CLV32_1872 | Not Available | Positive | 2133333 - 2133752 | 14613.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
