Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 3,4-dioxygenase beta subunit | CLV32_1641 | Not Available | Negative | 1849377 - 1850132 | 26363.1 |
| lyttr family two component transcriptional regulator | CLV32_1642 | Not Available | Negative | 1850199 - 1850900 | 26903.9 |
| histidine kinase | CLV32_1643 | Not Available | Negative | 1850900 - 1852051 | 44002.0 |
| laci family transcriptional regulator | CLV32_1644 | Not Available | Positive | 1852256 - 1853293 | 38605.3 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | CLV32_1645 | Not Available | Positive | 1853286 - 1854026 | 26152.8 |
| laci family transcriptional regulator | CLV32_1646 | Not Available | Negative | 1854038 - 1855066 | 37726.4 |
| sss family solute:na+ symporter | CLV32_1647 | Not Available | Negative | 1855153 - 1856841 | 61387.7 |
| d-xylose isomerase | CLV32_1648 | Not Available | Negative | 1856933 - 1858264 | 49878.4 |
| xylulokinase | CLV32_1649 | Not Available | Negative | 1858287 - 1859762 | 53392.6 |
| sialate o-acetylesterase | CLV32_1650 | Not Available | Positive | 1860066 - 1861994 | 72251.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
