Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | CLV32_1590 | Not Available | Negative | 1797959 - 1798741 | 27923.3 |
| Trna-his | Not Available | Not Available | Positive | 1799925 - 1799998 | Not Available |
| ribonuclease hi | CLV32_1593 | Not Available | Positive | 1800175 - 1800648 | 17542.2 |
| d-fructose 1,6-bisphosphatase | CLV32_1594 | Not Available | Negative | 1800645 - 1801718 | 39067.1 |
| hypothetical protein | CLV32_1595 | Not Available | Negative | 1801742 - 1802233 | 18465.1 |
| trna1val (adenine37-n6)-methyltransferase | CLV32_1596 | Not Available | Negative | 1802282 - 1802986 | 26491.8 |
| glyoxylase i family protein | CLV32_1597 | Not Available | Negative | 1802988 - 1803371 | 14487.3 |
| protein tonb | CLV32_1598 | Not Available | Negative | 1803483 - 1804313 | 30128.4 |
| glutamine synthetase | CLV32_1599 | Not Available | Positive | 1804563 - 1806746 | 81539.6 |
| phosphoribosylformylglycinamidine cyclo-ligase | CLV32_1600 | Not Available | Positive | 1806845 - 1808026 | 42853.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
