Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-amino acid n-acyltransferase ynca | CLV32_1560 | Not Available | Positive | 1764095 - 1764568 | 17865.2 |
| aspartate kinase | CLV32_1561 | Not Available | Positive | 1764611 - 1765873 | 47238.2 |
| hypothetical protein | CLV32_1562 | Not Available | Positive | 1765875 - 1767056 | 43666.7 |
| 1-cys peroxiredoxin | CLV32_1563 | Not Available | Negative | 1767094 - 1767729 | 23572.0 |
| uncharacterized protein yece (duf72 family) | CLV32_1564 | Not Available | Negative | 1767777 - 1768709 | 35681.3 |
| trypsin-like peptidase | CLV32_1565 | Not Available | Negative | 1768790 - 1769938 | 42289.6 |
| rna polymerase sigma factor (sigma-70 family) | CLV32_1566 | Not Available | Negative | 1769899 - 1770468 | 22033.3 |
| hypothetical protein | CLV32_1567 | Not Available | Positive | 1770609 - 1770827 | 7705.17 |
| adenylosuccinate lyase | CLV32_1568 | Not Available | Positive | 1770961 - 1772307 | 50740.5 |
| fe-s cluster biogenesis protein nfua | CLV32_1569 | Not Available | Positive | 1772382 - 1772933 | 20236.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
