Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quercetin dioxygenase-like cupin family protein | CLV32_1479 | Not Available | Negative | 1667155 - 1667550 | 14432.8 |
| hypothetical protein | CLV32_1480 | Not Available | Negative | 1667609 - 1667869 | 9440.87 |
| arac family transcriptional regulator | CLV32_1481 | Not Available | Positive | 1667870 - 1668766 | 34595.9 |
| histidine kinase | CLV32_1482 | Not Available | Positive | 1669137 - 1669946 | 30735.6 |
| luxr family two component transcriptional regulator | CLV32_1483 | Not Available | Positive | 1669939 - 1670565 | 23456.8 |
| collagen triple helix repeat protein | CLV32_1484 | Not Available | Negative | 1670712 - 1672559 | 60191.4 |
| type ix secretion system porp/sprf family membrane protein | CLV32_1485 | Not Available | Negative | 1672600 - 1673478 | 32472.4 |
| gliding motility-associated-like protein/predicted secreted protein (por secretion system target) | CLV32_1486 | Not Available | Negative | 1673484 - 1673981 | 17758.8 |
| deoxyribodipyrimidine photo-lyase (single-stranded dna-specific) | CLV32_1487 | Not Available | Negative | 1674116 - 1675501 | 54504.1 |
| hypothetical protein | CLV32_1488 | Not Available | Negative | 1675613 - 1675822 | 8006.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
