Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative mfs family arabinose efflux permease | CLV32_1418 | Not Available | Positive | 1602743 - 1604098 | 50048.6 |
| gaf sensor signal transduction histidine kinase | CLV32_1419 | Not Available | Positive | 1604240 - 1605457 | 45369.2 |
| hypothetical protein | CLV32_1420 | Not Available | Negative | 1605454 - 1605636 | 6788.16 |
| putative membrane protein ypha (doxx/surf4 family) | CLV32_1421 | Not Available | Positive | 1605713 - 1606153 | 16303.6 |
| hypothetical protein | CLV32_1422 | Not Available | Positive | 1606220 - 1608682 | 91213.8 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | CLV32_1423 | Not Available | Negative | 1608632 - 1609465 | 29066.5 |
| d-methionine transport system substrate-binding protein | CLV32_1424 | Not Available | Negative | 1609470 - 1610285 | 29629.8 |
| d-methionine transport system permease protein | CLV32_1425 | Not Available | Negative | 1610299 - 1610955 | 23295.6 |
| d-methionine transport system atp-binding protein | CLV32_1426 | Not Available | Negative | 1610948 - 1611979 | 37453.6 |
| thioredoxin reductase | CLV32_1427 | Not Available | Negative | 1612116 - 1613024 | 31963.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
