Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inosine-uridine preferring nucleoside hydrolase | CLV32_1283 | Not Available | Negative | 1430277 - 1431296 | 37262.1 |
| ribose-5-phosphate isomerase | CLV32_1284 | Not Available | Negative | 1431300 - 1431953 | 23203.3 |
| putative membrane protein | CLV32_1285 | Not Available | Negative | 1432094 - 1433005 | 34969.4 |
| peroxiredoxin | CLV32_1286 | Not Available | Positive | 1433094 - 1433618 | 19744.1 |
| istb-like atp binding protein | CLV32_1287 | Not Available | Positive | 1433618 - 1434664 | 39554.8 |
| regulatory luxr family protein | CLV32_1288 | Not Available | Negative | 1434678 - 1435409 | 28055.7 |
| trna (cmo5u34)-methyltransferase | CLV32_1289 | Not Available | Positive | 1435856 - 1436578 | 26946.2 |
| hypothetical protein | CLV32_1290 | Not Available | Negative | 1436640 - 1436819 | 6519.76 |
| hypothetical protein | CLV32_1291 | Not Available | Positive | 1436994 - 1437176 | 6759.59 |
| mannonate dehydratase | CLV32_1292 | Not Available | Negative | 1437227 - 1438402 | 43842.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
