Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp-like camp-binding protein | CLV32_1232 | Not Available | Negative | 1374238 - 1374831 | 23626.2 |
| hypothetical protein | CLV32_1233 | Not Available | Positive | 1374947 - 1375294 | 13524.7 |
| l-lysine 6-transaminase precursor | CLV32_1234 | Not Available | Positive | 1375471 - 1376802 | 50098.9 |
| hypothetical protein | CLV32_1235 | Not Available | Positive | 1376804 - 1377205 | 14772.0 |
| uncharacterized protein (tigr03435 family) | CLV32_1236 | Not Available | Negative | 1377206 - 1378399 | 44856.5 |
| trypsin | CLV32_1237 | Not Available | Negative | 1378410 - 1379291 | 31716.4 |
| phospho-acceptor domain-containing protein | CLV32_1238 | Not Available | Positive | 1379418 - 1380911 | 56427.2 |
| dna-binding response ompr family regulator | CLV32_1239 | Not Available | Positive | 1380913 - 1381596 | 25922.5 |
| glutaryl-coa dehydrogenase | CLV32_1240 | Not Available | Negative | 1381597 - 1382955 | 50123.6 |
| bacillithiol biosynthesis deacetylase bshb1 | CLV32_1241 | Not Available | Negative | 1382998 - 1383714 | 26826.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
