Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | CLV32_1032 | Not Available | Negative | 1158981 - 1159784 | 29459.4 |
| thymidylate synthase | CLV32_1033 | Not Available | Positive | 1159920 - 1160714 | 30196.1 |
| dihydrofolate reductase | CLV32_1034 | Not Available | Positive | 1160711 - 1161196 | 18114.7 |
| secd/secf fusion protein | CLV32_1035 | Not Available | Positive | 1161308 - 1164241 | 106337.0 |
| hydroxymethylglutaryl-coa lyase | CLV32_1036 | Not Available | Positive | 1164315 - 1165178 | 31441.4 |
| putative gnat family n-acyltransferase | CLV32_1037 | Not Available | Negative | 1165179 - 1165610 | 16206.5 |
| fructose-bisphosphate aldolase | CLV32_1038 | Not Available | Negative | 1165664 - 1166743 | 39771.1 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | CLV32_1039 | Not Available | Positive | 1166896 - 1167741 | 31148.9 |
| putative alpha-1,2-mannosidase | CLV32_1040 | Not Available | Negative | 1168176 - 1170470 | 86272.9 |
| hypothetical protein | CLV32_1041 | Not Available | Negative | 1170525 - 1170746 | 8089.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
