Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein with beta-barrel domain | CLV32_0972 | Not Available | Positive | 1087466 - 1088179 | 25613.8 |
| hypothetical protein | CLV32_0973 | Not Available | Negative | 1088236 - 1089633 | 52438.4 |
| dgtpase | CLV32_0974 | Not Available | Negative | 1089718 - 1091064 | 50106.1 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | CLV32_0975 | Not Available | Negative | 1091076 - 1093604 | 95994.5 |
| polysaccharide deacetylase | CLV32_0976 | Not Available | Positive | 1093796 - 1094671 | 32741.1 |
| grea/greb family transcription elongation factor | CLV32_0977 | Not Available | Negative | 1094739 - 1095197 | 16775.0 |
| nitroreductase | CLV32_0978 | Not Available | Negative | 1095197 - 1095775 | 21694.1 |
| atpase subunit of abc transporter with duplicated atpase domains | CLV32_0979 | Not Available | Positive | 1095883 - 1097502 | 60968.3 |
| g3e family gtpase | CLV32_0980 | Not Available | Negative | 1097735 - 1098937 | 45721.6 |
| merc mercury resistance protein | CLV32_0981 | Not Available | Positive | 1099010 - 1099387 | 13356.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
