Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, complete
Gene Summary
Adenine Count
97008 bp
Thymine Count
97694 bp
Guanine Count
119027 bp
Cytosine Count
117609 bp
Genome Length
431338 bp
Protein-coding Genes
381 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-d crispr-associated helicase cas3' | HLAC_RS18500 | Not Available | Positive | 329495 - 331648 | 81149.7 |
| crispr-associated protein cas4 | HLAC_RS17285 | Not Available | Positive | 331645 - 332262 | 23520.6 |
| crispr-associated endonuclease cas1 | HLAC_RS17290 | Not Available | Positive | 332259 - 333254 | 37601.3 |
| crispr-associated endonuclease cas2 | HLAC_RS18505 | Not Available | Positive | 333257 - 333529 | 10501.0 |
| type ii toxin-antitoxin system vapc family toxin | HLAC_RS17295 | Not Available | Negative | 339519 - 339875 | 13072.2 |
| antitoxin vapb family protein | HLAC_RS17300 | Not Available | Negative | 339910 - 340152 | 9101.66 |
| dna polymerase i | HLAC_RS19750 | Not Available | Negative | 340168 - 340617 | 17143.8 |
| tyrosine-type recombinase/integrase | HLAC_RS17310 | Not Available | Negative | 340614 - 341231 | 23031.1 |
| type iv pilin | HLAC_RS18515 | Not Available | Negative | 341444 - 342091 | 23703.3 |
| ish3-like element ishla1 family transposase | HLAC_RS17315 | Not Available | Positive | 342142 - 343308 | 44361.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
