Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 2961720 - 2961806 | Not Available |
| predicted rna binding protein ycfa, dsrbd-like fold, hica-like mrna interferase family | SAMN04489864_107102 | Not Available | Positive | 2962182 - 2962397 | 8055.91 |
| hypothetical protein | SAMN04489864_107103 | Not Available | Positive | 2962455 - 2962841 | 14160.9 |
| uracil-dna glycosylase | SAMN04489864_107104 | Not Available | Positive | 2963037 - 2963615 | 21804.3 |
| hypothetical protein | SAMN04489864_107105 | Not Available | Positive | 2963652 - 2964704 | 40774.2 |
| hypothetical protein | SAMN04489864_107106 | Not Available | Positive | 2964719 - 2965081 | 14018.6 |
| hypothetical protein | SAMN04489864_107107 | Not Available | Negative | 2965074 - 2965856 | 29057.5 |
| putative efflux protein, mate family | SAMN04489864_107108 | Not Available | Negative | 2966080 - 2967504 | 51356.5 |
| arac-type dna-binding protein | SAMN04489864_107109 | Not Available | Positive | 2967616 - 2968494 | 33651.9 |
| nadp-dependent aldehyde dehydrogenase | SAMN04489864_107110 | Not Available | Positive | 2968500 - 2969969 | 52806.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
