Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | SAMN04489864_10731 | Not Available | Positive | 2850443 - 2851786 | 49606.3 |
| rnd family efflux transporter, mfp subunit | SAMN04489864_10732 | Not Available | Positive | 2851789 - 2852856 | 38302.1 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04489864_10733 | Not Available | Positive | 2852882 - 2856073 | 116211.0 |
| superfamily ii dna or rna helicase, snf2 family | SAMN04489864_10734 | Not Available | Positive | 2856196 - 2859123 | 113433.0 |
| hypothetical protein | SAMN04489864_10735 | Not Available | Positive | 2859178 - 2859468 | 10934.9 |
| outer membrane receptor proteins, mostly fe transport | SAMN04489864_10736 | Not Available | Negative | 2859489 - 2861906 | 88365.8 |
| arginine decarboxylase | SAMN04489864_10737 | Not Available | Negative | 2862072 - 2863466 | 54099.5 |
| dna-binding transcriptional regulator, gntr family | SAMN04489864_10738 | Not Available | Positive | 2863592 - 2864623 | 39264.0 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04489864_10739 | Not Available | Negative | 2864639 - 2865325 | 26684.5 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN04489864_10740 | Not Available | Negative | 2865328 - 2865999 | 24882.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
