Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN04489864_10721 | Not Available | Negative | 2841504 - 2842481 | 37187.2 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04489864_10722 | Not Available | Positive | 2842624 - 2843046 | 16041.5 |
| doxx-like family protein | SAMN04489864_10723 | Not Available | Positive | 2843050 - 2843448 | 14833.5 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04489864_10724 | Not Available | Positive | 2843475 - 2843921 | 16682.3 |
| hypothetical protein | SAMN04489864_10725 | Not Available | Positive | 2843923 - 2844306 | 14610.6 |
| sugar phosphate isomerase/epimerase | SAMN04489864_10726 | Not Available | Negative | 2844313 - 2845158 | 31340.8 |
| hydroxypyruvate isomerase | SAMN04489864_10727 | Not Available | Positive | 2845405 - 2846331 | 34707.7 |
| bifunctional non-homologous end joining protein ligd | SAMN04489864_10728 | Not Available | Positive | 2846414 - 2849131 | 102768.0 |
| dna-binding transcriptional regulator gbsr, marr family | SAMN04489864_10729 | Not Available | Positive | 2849222 - 2849698 | 18070.0 |
| dna-binding transcriptional regulator, acrr family | SAMN04489864_10730 | Not Available | Positive | 2849798 - 2850421 | 23776.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
