Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family protein | SAMN04489864_106251 | Not Available | Positive | 2791996 - 2792715 | 27127.3 |
| probable oxidoreductase, llm family | SAMN04489864_106252 | Not Available | Positive | 2792786 - 2793799 | 37507.0 |
| cytidine deaminase | SAMN04489864_106253 | Not Available | Negative | 2793796 - 2794287 | 17872.5 |
| family of unknown function | SAMN04489864_106254 | Not Available | Positive | 2794509 - 2799449 | 181523.0 |
| outer membrane protein assembly factor bama | SAMN04489864_106255 | Not Available | Positive | 2799436 - 2801727 | 87026.8 |
| membrane protein | SAMN04489864_106256 | Not Available | Positive | 2801732 - 2802730 | 36193.2 |
| signal transduction histidine kinase | SAMN04489864_106257 | Not Available | Negative | 2802727 - 2804106 | 51142.7 |
| topoisomerase-4 subunit b | SAMN04489864_106258 | Not Available | Negative | 2804220 - 2806112 | 71801.5 |
| basic amino acid/polyamine antiporter, apa family | SAMN04489864_106259 | Not Available | Positive | 2806237 - 2807592 | 49555.9 |
| cystathionine beta-lyase | SAMN04489864_106260 | Not Available | Positive | 2807592 - 2808761 | 42965.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
