Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein pspc (stress-responsive transcriptional regulator) | SAMN04489864_106241 | Not Available | Negative | 2778360 - 2779028 | 25176.2 |
| short-chain dehydrogenase | SAMN04489864_106242 | Not Available | Negative | 2779047 - 2779760 | 25903.1 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04489864_106243 | Not Available | Positive | 2779874 - 2780608 | 25949.5 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN04489864_106244 | Not Available | Positive | 2780605 - 2781357 | 28103.9 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN04489864_106245 | Not Available | Positive | 2781510 - 2782397 | 33752.6 |
| hmuy protein | SAMN04489864_106246 | Not Available | Negative | 2782447 - 2783505 | 37829.8 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN04489864_106247 | Not Available | Negative | 2783530 - 2785611 | 77042.3 |
| hypothetical protein | SAMN04489864_106248 | Not Available | Positive | 2785840 - 2786874 | 38942.8 |
| x-pro dipeptidyl-peptidase | SAMN04489864_106249 | Not Available | Positive | 2786990 - 2788837 | 67561.5 |
| topoisomerase-4 subunit a | SAMN04489864_106250 | Not Available | Negative | 2788937 - 2791891 | 110640.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
