Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04489864_106201 | Not Available | Positive | 2744426 - 2745229 | 30434.6 |
| hypothetical protein | SAMN04489864_106202 | Not Available | Positive | 2745230 - 2745640 | 15879.2 |
| large subunit ribosomal protein l9 | SAMN04489864_106203 | Not Available | Negative | 2745791 - 2746234 | 16173.8 |
| small subunit ribosomal protein s18 | SAMN04489864_106204 | Not Available | Negative | 2746245 - 2746508 | 10256.7 |
| small subunit ribosomal protein s6 | SAMN04489864_106205 | Not Available | Negative | 2746508 - 2746870 | 13680.4 |
| hypothetical protein | SAMN04489864_106206 | Not Available | Negative | 2747045 - 2747635 | 22342.0 |
| arac-type dna-binding protein | SAMN04489864_106207 | Not Available | Positive | 2747797 - 2748675 | 33407.0 |
| dna polymerase-3 subunit gamma/tau | SAMN04489864_106208 | Not Available | Positive | 2748744 - 2750582 | 69122.6 |
| hypothetical protein | SAMN04489864_106209 | Not Available | Negative | 2750572 - 2750985 | 15449.9 |
| isocitrate dehydrogenase | SAMN04489864_106210 | Not Available | Negative | 2751096 - 2753315 | 79865.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
