Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | SAMN04489864_106191 | Not Available | Negative | 2734566 - 2735282 | 26099.0 |
| Trna-phe | Not Available | Not Available | Positive | 2735601 - 2735673 | Not Available |
| 4fe-4s dicluster domain-containing protein | SAMN04489864_106193 | Not Available | Positive | 2735908 - 2737203 | 48040.1 |
| cysteine-rich domain-containing protein | SAMN04489864_106194 | Not Available | Positive | 2737241 - 2738029 | 28939.1 |
| hypothetical protein | SAMN04489864_106195 | Not Available | Negative | 2738048 - 2738515 | 17854.3 |
| hypothetical protein | SAMN04489864_106196 | Not Available | Positive | 2738566 - 2739051 | 18768.1 |
| asma family protein | SAMN04489864_106197 | Not Available | Positive | 2739078 - 2741504 | 90224.5 |
| monofunctional biosynthetic peptidoglycan transglycosylase | SAMN04489864_106198 | Not Available | Negative | 2741501 - 2742223 | 27833.5 |
| lyttr dna-binding domain-containing protein | SAMN04489864_106199 | Not Available | Positive | 2742260 - 2743072 | 31442.2 |
| protocatechuate 3,4-dioxygenase beta subunit | SAMN04489864_106200 | Not Available | Positive | 2743151 - 2744362 | 45891.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
