Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase (nad) | SAMN04489864_10681 | Not Available | Positive | 2616828 - 2617766 | 32894.1 |
| aspartyl protease | SAMN04489864_10682 | Not Available | Positive | 2617767 - 2618192 | 15429.8 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04489864_10683 | Not Available | Positive | 2618239 - 2618898 | 24997.4 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04489864_10684 | Not Available | Positive | 2618962 - 2619495 | 19828.1 |
| dna gyrase subunit b | SAMN04489864_10685 | Not Available | Negative | 2619565 - 2621523 | 72142.8 |
| periplasmic chaperone for outer membrane proteins skp | SAMN04489864_10686 | Not Available | Positive | 2621723 - 2622319 | 21886.9 |
| peroxiredoxin | SAMN04489864_10687 | Not Available | Negative | 2622462 - 2624378 | 70494.1 |
| ecsc protein family protein | SAMN04489864_10688 | Not Available | Positive | 2624480 - 2625232 | 28290.8 |
| heat shock protein hsp15 | SAMN04489864_10689 | Not Available | Negative | 2625229 - 2625627 | 15052.4 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN04489864_10690 | Not Available | Positive | 2625744 - 2626562 | 29675.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
