Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin q/bcp | SAMN04489864_10671 | Not Available | Positive | 2605253 - 2605711 | 16990.2 |
| transketolase | SAMN04489864_10672 | Not Available | Positive | 2605762 - 2606607 | 30816.5 |
| transketolase | SAMN04489864_10673 | Not Available | Positive | 2606673 - 2607629 | 34653.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04489864_10674 | Not Available | Positive | 2607694 - 2608254 | 21935.2 |
| hypothetical protein | SAMN04489864_10675 | Not Available | Positive | 2608309 - 2608914 | 22527.3 |
| hypothetical protein | SAMN04489864_10676 | Not Available | Positive | 2608918 - 2609442 | 20501.9 |
| acetylornithine/succinyldiaminopimelate/ putresci ne aminotransferase | SAMN04489864_10677 | Not Available | Positive | 2609588 - 2610763 | 42956.3 |
| protein of unknown function duf58 | SAMN04489864_10678 | Not Available | Negative | 2610770 - 2611690 | 35255.3 |
| thioredoxin | SAMN04489864_10679 | Not Available | Negative | 2611831 - 2612148 | 11547.0 |
| dna polymerase iii, alpha subunit | SAMN04489864_10680 | Not Available | Negative | 2612222 - 2616655 | 167181.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
