Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN04489864_10641 | Not Available | Negative | 2572554 - 2573717 | 44760.8 |
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN04489864_10642 | Not Available | Negative | 2573748 - 2575013 | 47659.8 |
| gmp synthase (glutamine-hydrolysing) | SAMN04489864_10643 | Not Available | Negative | 2575102 - 2576628 | 56176.6 |
| dcmp deaminase | SAMN04489864_10644 | Not Available | Negative | 2576698 - 2577153 | 16419.6 |
| glucose/galactose transporter | SAMN04489864_10645 | Not Available | Negative | 2577146 - 2578450 | 47004.6 |
| mfs transporter, fhs family, l-fucose permease | SAMN04489864_10646 | Not Available | Negative | 2578510 - 2579940 | 51022.4 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04489864_10647 | Not Available | Positive | 2580163 - 2580786 | 23267.1 |
| amidophosphoribosyltransferase | SAMN04489864_10648 | Not Available | Negative | 2580955 - 2582856 | 71896.1 |
| glutamate racemase | SAMN04489864_10649 | Not Available | Negative | 2582959 - 2583831 | 32747.1 |
| periplasmic chaperone for outer membrane proteins skp | SAMN04489864_10650 | Not Available | Negative | 2583889 - 2584506 | 22496.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
