Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione synthase/rimk-type ligase, atp-grasp superfamily | SAMN04489864_10621 | Not Available | Positive | 2549917 - 2550918 | 38770.6 |
| atp-dependent clp protease atp-binding subunit clpc | SAMN04489864_10622 | Not Available | Negative | 2550941 - 2553478 | 94145.9 |
| abc-2 type transport system atp-binding protein | SAMN04489864_10623 | Not Available | Positive | 2553974 - 2554840 | 32650.6 |
| hypothetical protein | SAMN04489864_10624 | Not Available | Positive | 2554844 - 2555671 | 30800.8 |
| dna-binding transcriptional regulator yhcf, gntr family | SAMN04489864_10625 | Not Available | Positive | 2555675 - 2556046 | 14603.7 |
| hypothetical protein | SAMN04489864_10626 | Not Available | Positive | 2556049 - 2556804 | 28395.3 |
| atp-binding cassette protein, chvd family | SAMN04489864_10627 | Not Available | Positive | 2556882 - 2558534 | 61654.4 |
| response regulator receiver domain-containing protein | SAMN04489864_10628 | Not Available | Positive | 2558630 - 2559019 | 14899.2 |
| protein of unknown function | SAMN04489864_10629 | Not Available | Negative | 2559028 - 2559261 | 8923.87 |
| atp-independent rna helicase dbpa | SAMN04489864_10630 | Not Available | Negative | 2559348 - 2560751 | 52483.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
