Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_105281 | Not Available | Positive | 2476569 - 2476958 | 15160.6 |
| outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeat | SAMN04489864_105282 | Not Available | Positive | 2476974 - 2478704 | 64697.0 |
| wd40-like beta propeller repeat | SAMN04489864_105283 | Not Available | Positive | 2478853 - 2480289 | 53777.8 |
| rhodanese-related sulfurtransferase | SAMN04489864_105284 | Not Available | Positive | 2480349 - 2480666 | 11914.3 |
| l-alanine-dl-glutamate epimerase | SAMN04489864_105285 | Not Available | Negative | 2480871 - 2481815 | 34977.3 |
| hypothetical protein | SAMN04489864_105286 | Not Available | Positive | 2481954 - 2483087 | 43185.5 |
| hypothetical protein | SAMN04489864_105287 | Not Available | Positive | 2483295 - 2484275 | 37533.9 |
| rhomboid family protein | SAMN04489864_105288 | Not Available | Negative | 2484223 - 2484849 | 23915.6 |
| zinc carboxypeptidase | SAMN04489864_105289 | Not Available | Negative | 2484854 - 2486596 | 66672.8 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04489864_105290 | Not Available | Negative | 2486657 - 2487325 | 25305.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
