Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna synthetase | SAMN04489864_105241 | Not Available | Negative | 2433352 - 2435460 | 79484.5 |
| muramoyltetrapeptide carboxypeptidase | SAMN04489864_105242 | Not Available | Positive | 2435499 - 2436398 | 33661.7 |
| putative oxidoreductase | SAMN04489864_105243 | Not Available | Positive | 2436400 - 2436810 | 14665.8 |
| hypothetical protein | SAMN04489864_105244 | Not Available | Negative | 2436841 - 2437287 | 16437.2 |
| putative holin-x, holin superfamily iii | SAMN04489864_105245 | Not Available | Negative | 2437271 - 2437651 | 14123.2 |
| gas vesicle protein | SAMN04489864_105246 | Not Available | Negative | 2437674 - 2437940 | 9375.08 |
| predicted purr-regulated permease perm | SAMN04489864_105247 | Not Available | Negative | 2438000 - 2439052 | 39414.2 |
| two-component system, ntrc family, response regulator hydg | SAMN04489864_105248 | Not Available | Negative | 2439059 - 2440471 | 52587.2 |
| hypothetical protein | SAMN04489864_105249 | Not Available | Negative | 2440544 - 2441191 | 22774.8 |
| enoyl-coa hydratase | SAMN04489864_105250 | Not Available | Negative | 2441209 - 2441991 | 27914.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
