Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid transporter | SAMN04489864_105211 | Not Available | Negative | 2393540 - 2395324 | 65360.7 |
| rna polymerase sigma-70 factor, bacteroides expansion family 1 | SAMN04489864_105212 | Not Available | Positive | 2395505 - 2396080 | 22283.4 |
| protein of unknown function | SAMN04489864_105213 | Not Available | Positive | 2396153 - 2397280 | 42155.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_105214 | Not Available | Positive | 2397439 - 2400936 | 129568.0 |
| susd family protein | SAMN04489864_105215 | Not Available | Positive | 2400946 - 2402412 | 55146.8 |
| protein of unknown function | SAMN04489864_105216 | Not Available | Positive | 2402424 - 2403164 | 27008.6 |
| pkd-like family protein | SAMN04489864_105217 | Not Available | Positive | 2403166 - 2404728 | 56315.6 |
| protein of unknown function | SAMN04489864_105218 | Not Available | Positive | 2404750 - 2407359 | 97722.3 |
| protein of unknown function | SAMN04489864_105219 | Not Available | Positive | 2407361 - 2409961 | 97484.3 |
| tetratricopeptide repeat-containing protein | SAMN04489864_105220 | Not Available | Negative | 2410055 - 2411935 | 70218.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
