Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN04489864_105131 | Not Available | Positive | 2302846 - 2304180 | 50512.0 |
| 7-keto-8-aminopelargonate synthetase | SAMN04489864_105132 | Not Available | Positive | 2304192 - 2305241 | 38634.3 |
| histidine phosphatase superfamily (branch 1) | SAMN04489864_105133 | Not Available | Positive | 2305251 - 2305775 | 19849.9 |
| predicted arabinose efflux permease, mfs family | SAMN04489864_105134 | Not Available | Positive | 2305787 - 2306992 | 43228.9 |
| d-alanyl-d-alanine dipeptidase | SAMN04489864_105135 | Not Available | Negative | 2306989 - 2307672 | 25992.5 |
| alanine dehydrogenase | SAMN04489864_105136 | Not Available | Negative | 2307679 - 2308905 | 44301.1 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN04489864_105137 | Not Available | Negative | 2308999 - 2309427 | 16136.2 |
| response regulator receiver domain-containing protein | SAMN04489864_105138 | Not Available | Negative | 2309443 - 2310996 | 60642.4 |
| hypothetical protein | SAMN04489864_105139 | Not Available | Positive | 2311098 - 2312321 | 46563.3 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMN04489864_105140 | Not Available | Positive | 2312437 - 2313507 | 38252.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
