Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl-trna synthetase | SAMN04489864_10531 | Not Available | Positive | 2183120 - 2184865 | 66215.3 |
| zinc carboxypeptidase | SAMN04489864_10532 | Not Available | Negative | 2185025 - 2187508 | 93505.7 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN04489864_10533 | Not Available | Positive | 2187649 - 2188950 | 48146.1 |
| gliding motility-associated lipoprotein gldh | SAMN04489864_10534 | Not Available | Negative | 2188947 - 2189441 | 18564.3 |
| cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development) | SAMN04489864_10535 | Not Available | Negative | 2189410 - 2190798 | 52121.0 |
| dna polymerase-3 subunit delta' | SAMN04489864_10536 | Not Available | Negative | 2190800 - 2191948 | 43320.4 |
| dna-binding transcriptional regulator, marr family | SAMN04489864_10537 | Not Available | Positive | 2192045 - 2192473 | 16243.8 |
| outer membrane receptor proteins, mostly fe transport | SAMN04489864_10538 | Not Available | Positive | 2192487 - 2194913 | 89991.4 |
| alpha-glucosidase, glycosyl hydrolase family gh31 | SAMN04489864_10539 | Not Available | Positive | 2194997 - 2198830 | 142095.0 |
| putative holliday junction resolvase | SAMN04489864_10540 | Not Available | Positive | 2198832 - 2199242 | 15433.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
