Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04489864_104382 | Not Available | Positive | 2149123 - 2149761 | 23292.9 |
| dihydrofolate reductase | SAMN04489864_104383 | Not Available | Positive | 2149772 - 2150281 | 18715.7 |
| flavodoxin | SAMN04489864_104384 | Not Available | Positive | 2150291 - 2150932 | 24515.1 |
| metallo-beta-lactamase superfamily protein | SAMN04489864_104385 | Not Available | Positive | 2150946 - 2151845 | 33693.8 |
| protein of unknown function | SAMN04489864_104386 | Not Available | Positive | 2151842 - 2152519 | 25604.9 |
| nad dependent epimerase/dehydratase family protein | SAMN04489864_104387 | Not Available | Positive | 2152516 - 2153178 | 24685.3 |
| sodium/proton antiporter, cpa1 family | SAMN04489864_104388 | Not Available | Positive | 2153237 - 2154814 | 58315.7 |
| putative membrane protein | SAMN04489864_104389 | Not Available | Positive | 2154831 - 2155838 | 38838.8 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04489864_104390 | Not Available | Positive | 2155933 - 2156637 | 25833.0 |
| pas domain s-box-containing protein | SAMN04489864_104391 | Not Available | Positive | 2156739 - 2158220 | 56737.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
