Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper chaperone | SAMN04489864_104262 | Not Available | Positive | 2023090 - 2023302 | 7733.28 |
| arac-type dna-binding protein | SAMN04489864_104263 | Not Available | Positive | 2023437 - 2023979 | 20779.9 |
| hypothetical protein | SAMN04489864_104264 | Not Available | Positive | 2024138 - 2024536 | 14970.1 |
| copper chaperone copz | SAMN04489864_104265 | Not Available | Positive | 2024637 - 2025005 | 13435.2 |
| heavy metal efflux pump, czca family | SAMN04489864_104266 | Not Available | Positive | 2025078 - 2026349 | 47258.4 |
| cu(i)/ag(i) efflux system membrane protein cusa/sila | SAMN04489864_104267 | Not Available | Positive | 2026346 - 2028283 | 71757.9 |
| outer membrane protein tolc | SAMN04489864_104268 | Not Available | Positive | 2028270 - 2029520 | 47986.1 |
| multidrug efflux pump subunit acra (membrane-fusion protein) | SAMN04489864_104269 | Not Available | Positive | 2029498 - 2030706 | 44031.5 |
| membrane fusion protein, cu(i)/ag(i) efflux system | SAMN04489864_104270 | Not Available | Positive | 2030711 - 2031928 | 44853.3 |
| protein of unknown function | SAMN04489864_104271 | Not Available | Positive | 2031965 - 2032531 | 20020.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
