Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | SAMN04489864_104231 | Not Available | Positive | 1983588 - 1983992 | 14760.3 |
| hypothetical protein | SAMN04489864_104232 | Not Available | Negative | 1984028 - 1984807 | 30185.8 |
| abc-2 type transport system atp-binding protein | SAMN04489864_104233 | Not Available | Negative | 1984804 - 1985712 | 33818.5 |
| outer membrane cobalamin receptor protein | SAMN04489864_104234 | Not Available | Negative | 1985871 - 1988033 | 79719.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_104236 | Not Available | Positive | 1988709 - 1992152 | 126161.0 |
| starch-binding associating with outer membrane | SAMN04489864_104237 | Not Available | Positive | 1992172 - 1994067 | 70628.8 |
| two component regulator propeller | SAMN04489864_104238 | Not Available | Negative | 1994182 - 1998246 | 153987.0 |
| right handed beta helix region | SAMN04489864_104239 | Not Available | Positive | 1998451 - 1999875 | 53675.8 |
| beta-galactosidase | SAMN04489864_104240 | Not Available | Positive | 1999842 - 2001971 | 79890.1 |
| hypothetical protein | SAMN04489864_104241 | Not Available | Positive | 2002139 - 2002810 | 24794.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
