Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable lipoprotein nlpc | SAMN04489864_104181 | Not Available | Positive | 1922623 - 1923105 | 17895.7 |
| peroxiredoxin | SAMN04489864_104182 | Not Available | Positive | 1923111 - 1923665 | 20621.1 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN04489864_104183 | Not Available | Negative | 1923777 - 1925678 | 72646.6 |
| protein of unknown function | SAMN04489864_104184 | Not Available | Negative | 1925679 - 1927649 | 75221.2 |
| dna polymerase-3 subunit epsilon | SAMN04489864_104185 | Not Available | Positive | 1927810 - 1928739 | 35303.5 |
| hypothetical protein | SAMN04489864_104186 | Not Available | Positive | 1928743 - 1930602 | 70724.5 |
| hypothetical protein | SAMN04489864_104187 | Not Available | Negative | 1930599 - 1931441 | 31562.1 |
| epoxyqueuosine reductase | SAMN04489864_104188 | Not Available | Negative | 1931492 - 1932427 | 35367.5 |
| hypothetical protein | SAMN04489864_104189 | Not Available | Positive | 1932504 - 1932725 | 8168.73 |
| holliday junction dna helicase subunit ruvb | SAMN04489864_104190 | Not Available | Negative | 1932731 - 1933753 | 37448.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
