Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminodeoxyfutalosine synthase | SAMN04489864_104171 | Not Available | Positive | 1910403 - 1911587 | 45576.7 |
| probable phosphoglycerate mutase | SAMN04489864_104172 | Not Available | Positive | 1911597 - 1912229 | 24412.1 |
| chorismate dehydratase | SAMN04489864_104173 | Not Available | Positive | 1912243 - 1912968 | 26835.7 |
| cubico group peptidase, beta-lactamase class c family | SAMN04489864_104174 | Not Available | Negative | 1912978 - 1914174 | 44717.3 |
| outer membrane receptor proteins, mostly fe transport | SAMN04489864_104175 | Not Available | Negative | 1914205 - 1916568 | 90106.0 |
| histidine kinase | SAMN04489864_104176 | Not Available | Positive | 1916768 - 1917880 | 43120.7 |
| dna-binding response regulator, lytr/algr family | SAMN04489864_104177 | Not Available | Positive | 1917852 - 1918559 | 27090.3 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04489864_104178 | Not Available | Negative | 1918582 - 1919463 | 31676.9 |
| dna-binding transcriptional regulator, hxlr family | SAMN04489864_104179 | Not Available | Positive | 1919545 - 1919901 | 13521.6 |
| dna mismatch repair protein muts | SAMN04489864_104180 | Not Available | Positive | 1920038 - 1922614 | 97123.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
