Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyl 1,2-cyclic phosphodiesterase | SAMN04489864_104130 | Not Available | Negative | 1873708 - 1874499 | 29373.5 |
| hypothetical protein | SAMN04489864_104131 | Not Available | Positive | 1874612 - 1875013 | 14544.5 |
| hypothetical protein | SAMN04489864_104132 | Not Available | Positive | 1875179 - 1875358 | 6471.76 |
| hypothetical protein | SAMN04489864_104133 | Not Available | Negative | 1875412 - 1875765 | 13874.2 |
| putative membrane protein | SAMN04489864_104134 | Not Available | Negative | 1875890 - 1876540 | 24165.8 |
| hypothetical protein | SAMN04489864_104135 | Not Available | Negative | 1876557 - 1876835 | 10471.6 |
| amidohydrolase, pncc family | SAMN04489864_104136 | Not Available | Negative | 1877068 - 1877361 | 10721.1 |
| ktsc domain-containing protein | SAMN04489864_104137 | Not Available | Positive | 1877508 - 1877687 | 6925.53 |
| rna polymerase, sigma subunit, ecf family | SAMN04489864_104138 | Not Available | Negative | 1877689 - 1878219 | 20745.7 |
| hypothetical protein | SAMN04489864_104139 | Not Available | Positive | 1878652 - 1878879 | 8135.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
