Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN04489864_104100 | Not Available | Negative | 1829751 - 1831121 | 51773.0 |
| hlyd family secretion protein | SAMN04489864_104101 | Not Available | Positive | 1831460 - 1832659 | 44834.8 |
| putative abc transport system atp-binding protein | SAMN04489864_104102 | Not Available | Positive | 1832740 - 1833438 | 26012.4 |
| putative abc transport system permease protein | SAMN04489864_104103 | Not Available | Positive | 1833484 - 1835835 | 88034.2 |
| abc-type transport system, involved in lipoprotein release, permease component | SAMN04489864_104104 | Not Available | Positive | 1835872 - 1838241 | 87841.5 |
| abc-type antimicrobial peptide transport system, permease component | SAMN04489864_104105 | Not Available | Positive | 1838298 - 1840676 | 88362.1 |
| abc-type transport system, involved in lipoprotein release, permease component | SAMN04489864_104106 | Not Available | Positive | 1840704 - 1843082 | 88093.3 |
| putative abc transport system permease protein | SAMN04489864_104107 | Not Available | Positive | 1843142 - 1845535 | 89322.2 |
| putative abc transport system permease protein | SAMN04489864_104108 | Not Available | Positive | 1845562 - 1847937 | 87953.1 |
| macb-like core domain-containing protein | SAMN04489864_104109 | Not Available | Positive | 1848109 - 1850499 | 89060.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
