Chitinophaga terrae

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga terrae is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology and non-spore-forming nature. This microbe is part of the broader Chitinophaga genus, which is known for its role in the degradation of chitin, a biopolymer found in the exoskeletons of arthropods and the cell walls of fungi. The aerobic metabolism of Chitinophaga terrae suggests that it requires oxygen for growth and may play a significant role in soil ecosystems, particularly in the breakdown of organic matter. Given its non-spore-forming trait, Chitinophaga terrae may be less resilient to extreme environmental conditions compared to spore-forming microorganisms. However, its aerobic capabilities position it to thrive in well-aerated environments, where it can contribute to nutrient cycling by facilitating the decomposition of chitinous materials. This function is crucial for maintaining soil health and fertility, as it aids in the recycling of nitrogen and other essential nutrients. In summary, Chitinophaga terrae exemplifies the complex interactions that bacteria have with their environment, particularly in soil ecosystems, where their metabolic processes can significantly influence organic matter decomposition and nutrient availability. Its role in chitin degradation highlights the importance of this microbe in the ecological balance and sustainability of terrestrial habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga terrae (ex Kim and Jung 2007)
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga terrae Kim and Jung 2007 strain DSM 23920 genome

Gene Summary

Adenine Count

1789851 bp

Thymine Count

1799820 bp

Guanine Count

1516770 bp

Cytosine Count

1520956 bp

Genome Length

6630860 bp

Protein-coding Genes

5584 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alkylated dna repair dioxygenase alkbSAMN05660909_05364Not AvailableNegative6305724 - 630634123638.0
peptidase family m28SAMN05660909_05365Not AvailableNegative6306502 - 630749136529.1
cysteinyl-trna synthetaseSAMN05660909_05366Not AvailableNegative6307509 - 630912561694.4
metal-dependent hydrolase, endonuclease/exonuclease/phosphatase familySAMN05660909_05367Not AvailableNegative6309163 - 631030243689.8
metal-dependent hydrolase, endonuclease/exonuclease/phosphatase familySAMN05660909_05368Not AvailableNegative6310331 - 631143141537.7
membrane associated serine protease, rhomboid familySAMN05660909_05369Not AvailableNegative6311551 - 631247134231.9
rhomboid family proteinSAMN05660909_05370Not AvailableNegative6312517 - 631334431625.5
23s rrna (uracil1939-c5)-methyltransferaseSAMN05660909_05371Not AvailableNegative6313357 - 631483255207.9
thiol-disulfide isomerase or thioredoxinSAMN05660909_05372Not AvailablePositive6314884 - 631629053396.4
outer membrane protein beta-barrel domain-containing proteinSAMN05660909_05373Not AvailablePositive6316416 - 631712325510.3

Displaying genes 5331 – 5340 of 5652 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.