Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 3 - 203 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 7 - 1217 | 18.01 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 85 - 1613 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 209 - 320 | 18.01 |
| transposase and inactivated derivatives | SAMN04488505_1011 | Not Available | Negative | 1 - 288 | 10696.8 |
| acyltransferase family protein | SAMN04488505_1012 | Not Available | Positive | 424 - 1254 | 31823.7 |
| 2,4-dienoyl-coa reductase | SAMN04488505_1013 | Not Available | Negative | 1219 - 2346 | 40804.1 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488505_1014 | Not Available | Negative | 2427 - 3017 | 23042.9 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_1015 | Not Available | Negative | 3030 - 5837 | 101178.0 |
| kup system potassium uptake protein | SAMN04488505_1016 | Not Available | Negative | 6235 - 8190 | 73565.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
