Chitinophaga terrae

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga terrae is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology and non-spore-forming nature. This microbe is part of the broader Chitinophaga genus, which is known for its role in the degradation of chitin, a biopolymer found in the exoskeletons of arthropods and the cell walls of fungi. The aerobic metabolism of Chitinophaga terrae suggests that it requires oxygen for growth and may play a significant role in soil ecosystems, particularly in the breakdown of organic matter. Given its non-spore-forming trait, Chitinophaga terrae may be less resilient to extreme environmental conditions compared to spore-forming microorganisms. However, its aerobic capabilities position it to thrive in well-aerated environments, where it can contribute to nutrient cycling by facilitating the decomposition of chitinous materials. This function is crucial for maintaining soil health and fertility, as it aids in the recycling of nitrogen and other essential nutrients. In summary, Chitinophaga terrae exemplifies the complex interactions that bacteria have with their environment, particularly in soil ecosystems, where their metabolic processes can significantly influence organic matter decomposition and nutrient availability. Its role in chitin degradation highlights the importance of this microbe in the ecological balance and sustainability of terrestrial habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga terrae (ex Kim and Jung 2007)
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga terrae Kim and Jung 2007 strain DSM 23920 genome

Gene Summary

Adenine Count

1789851 bp

Thymine Count

1799820 bp

Guanine Count

1516770 bp

Cytosine Count

1520956 bp

Genome Length

6630860 bp

Protein-coding Genes

5584 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c oxidase cbb3-type subunit 3SAMN05660909_04653Not AvailableNegative5537353 - 553839637577.6
hypothetical proteinSAMN05660909_04654Not AvailableNegative5538398 - 55385897252.88
cytochrome c oxidase cbb3-type subunit i/iiSAMN05660909_04655Not AvailableNegative5538602 - 554076482110.4
cytochrome oxidase maturation protein, cbb3-typeSAMN05660909_04656Not AvailableNegative5540796 - 55409545901.17
cupin domain-containing proteinSAMN05660909_04657Not AvailableNegative5540961 - 554125110615.1
cu+-exporting atpaseSAMN05660909_04658Not AvailableNegative5541451 - 554388990904.5
iron-sulfur cluster repair protein ytfe, ric family, contains scdan and hemerythrin domainsSAMN05660909_04659Not AvailableNegative5543889 - 554444020887.4
crp/fnr family transcriptional regulator, anaerobic regulatory proteinSAMN05660909_04660Not AvailableNegative5544525 - 554523526634.4
23s rrna pseudouridine2457 synthaseSAMN05660909_04661Not AvailablePositive5545288 - 554587522542.5
tigr00255 family proteinSAMN05660909_04662Not AvailablePositive5545947 - 554682233659.6

Displaying genes 4631 – 4640 of 5652 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.